STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hydAD-hydantoinase. (464 aa)    
Predicted Functional Partners:
CBO2819
Putative iron-sulfur oxidoreductase.
 
 0.994
CBO0629
N-carbamoyl-L-amino acid hydrolase.
 
 
 0.967
pyrB
Aspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 
 0.949
CBO2820
Putative Pyridine nucleotide-disulphide oxidoreductase.
 
 
  0.925
pbuX-2
Xanthine permease.
 
  
 0.871
CBO2882
Putative peptidase.
 
  
 0.851
dpaL
Diaminopropionate ammonia-lyase.
 
    0.842
ssnA
Putative amidohydrolase.
 
  
 0.778
ygeW
Putative aspartate/ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
  
 0.761
ygfK
Pyridine nucleotide-disulfide oxidoreductase.
 
    0.749
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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