Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hydAD-hydantoinase. (464 aa)    
Predicted Functional Partners:
CBO2819
Putative iron-sulfur oxidoreductase.
 
 0.992
CBO0629
N-carbamoyl-L-amino acid hydrolase.
 
 
 0.970
pyrB
Aspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 
 0.947
CBO2820
Putative Pyridine nucleotide-disulphide oxidoreductase.
 
 
  0.926
dpaL
Diaminopropionate ammonia-lyase.
 
  
 0.848
pbuX-2
Xanthine permease.
 
  
 0.847
CBO2882
Putative peptidase.
 
  
 0.794
ssnA
Putative amidohydrolase.
 
  
 0.762
ygfK
Pyridine nucleotide-disulfide oxidoreductase.
 
    0.755
ygeW
Putative aspartate/ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
  
 0.755
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.