Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
glpQGlycerophosphoryl diester phosphodiesterase. (250 aa)    
Predicted Functional Partners:
CBO1190
Putative phosphodiesterase.
  
  
 
0.917
glpQ-2
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.909
CBO1518
ABC transporter, substrate-binding lipoprotein.
 
  
 0.728
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.717
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.582
CBO1517
ABC transporter, permease protein.
  
  
 0.556
CBO1219
Putative hydrolase; Belongs to the 5'(3')-deoxyribonucleotidase family.
   
    0.553
glpA
Putative anaerobic glycerol-3-phosphate dehydrogenase subunit a.
  
 
 0.525
CBO2927
Putative membrane protein; This CDS is also similar to CBO0992 (34.488 identity in 722 aa overlap) and to CBO0993 (34.669 identity in 724 aa overlap).
 
     0.477
pstA-2
Putative phosphate transport system permease protein.
  
  
 0.402
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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