Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cotS-2Putative spore coat protein S. (356 aa)    
Predicted Functional Partners:
CBO0082
Similar to Clostridium tetani conserved protein ctc00249 SWALL:Q899D4 (EMBL:AE015936) (438 aa) fasta scores: E(): 3.8e-27, 45.7 38d in 431 aa, and to Clostridium acetobutylicum hypothetical protein Cac2985 SWALL:Q97EX1 (EMBL:AE007795) (491 aa) fasta scores: E(): 5.8e-27, 40.65 38d in 487 aa.
  
     0.694
CBO3398
Putative exported protein.
  
     0.676
dgt
Putative metal dependent phosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
       0.642
CBO3173
Putative TPR-family repetative protein.
  
     0.636
CBO2657
Putative flagellar hook-length control protein.
  
     0.634
CBO3174
Conserved integral membrane protein.
  
     0.624
CBO3145
Small acid-soluble spore protein.
  
     0.620
CBO2084
Conserved hypothetical protein; CDS is truncated 37 residues at the C-terminus relative to its closest fasta match.
  
     0.618
CBO0404
Putative transcriptional regulator; Similar to Bacillus stearothermophilus transcriptional activator NprA SWALL:NPRA_BACST (SWALL:P43130) (406 aa) fasta scores: E(): 5.8e-06, 19.61 id in 413 aa, and to Bacillus subtilis response regulator aspartate phosphatase A RapA or GsiaA or spo0l or bsu12430 SWALL:RAPA_BACSU (SWALL:Q00828) (378 aa) fasta scores: E(): 0.0019, 21.46 38d in 368 aa.
  
     0.615
tufB
Elongation factor Tu.
      
 0.601
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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