rpmA protein (Clostridium botulinum A ATCC 3502)

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Score

rpmA

50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (100 aa)

Predicted Functional Partners:

rplU

0.999

CBO2988

0.996

rpsP

0.995

rpsI

0.994

rpsR

0.994

rplS

0.993

rplM

0.993

rpsO

0.992

rpsB

0.992

rplQ

0.992

Your Current Organism:

Clostridium botulinum A ATCC 3502

NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBO2988	rplM	CBO2988	CBO3446	Conserved hypothetical protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.411
CBO2988	rplS	CBO2988	CBO2444	Conserved hypothetical protein.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.596
CBO2988	rplU	CBO2988	CBO2989	Conserved hypothetical protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
CBO2988	rpmA	CBO2988	CBO2987	Conserved hypothetical protein.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.996
CBO2988	rpsB	CBO2988	CBO2435	Conserved hypothetical protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.841
CBO2988	rpsR	CBO2988	CBO3626	Conserved hypothetical protein.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.540
rplM	CBO2988	CBO3446	CBO2988	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Conserved hypothetical protein.	0.411
rplM	rplQ	CBO3446	CBO3451	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L17.	0.995
rplM	rplS	CBO3446	CBO2444	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplM	rplU	CBO3446	CBO2989	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmA	CBO3446	CBO2987	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.993
rplM	rpsB	CBO3446	CBO2435	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.993
rplM	rpsI	CBO3446	CBO3445	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplM	rpsO	CBO3446	CBO2414	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990
rplM	rpsP	CBO3446	CBO2448	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplM	rpsR	CBO3446	CBO3626	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplQ	rplM	CBO3451	CBO3446	50S ribosomal protein L17.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rplQ	rplS	CBO3451	CBO2444	50S ribosomal protein L17.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.989
rplQ	rplU	CBO3451	CBO2989	50S ribosomal protein L17.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.987
rplQ	rpmA	CBO3451	CBO2987	50S ribosomal protein L17.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.992