Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO3032Hypothetical phage-related membrane protein; Partial similarity to the C-terminus of several bacteriophage tail length determining proteins. (513 aa)    
Predicted Functional Partners:
CBO3031
Conserved hypothetical protein.
       0.788
CBO3031A
Hypothetical protein; No significant database matches.
       0.788
CBO3030
Similar to Clostridium tetani conserved protein ctc01102 SWALL:Q896A7 (EMBL:AE015939) (110 aa) fasta scores: E(): 9.8e-23, 56.36 38d in 110 aa.
       0.773
CBO3028
Conserved hypothetical protein; Weakly similar to the downstream CDS CB03029.
       0.749
CBO3029
Conserved hypothetical protein; Weakly similar to the upstream CDS CB03028.
       0.749
CBO3027
Conserved hypothetical protein.
       0.694
CBO3023
Conserved hypothetical protein.
     
 0.667
CBO3026
Conserved hypothetical protein; Note the product of this CDS is rich in the amino acids Asn Leu and Ile.
       0.664
CBO3025
Hypothetical protein; No significant database matches.
       0.659
CBO3024
Conserved hypothetical protein.
       0.651
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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