STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO3036Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
CBO3034
Conserved hypothetical protein.
       0.828
CBO3035
Conserved hypothetical protein.
       0.828
CBO3037
Conserved hypothetical protein.
       0.828
CBO3033
Similar to Clostridium tetani conserved protein ctc01097 SWALL:Q896B1 (EMBL:AE015939) (154 aa) fasta scores: E(): 1.6e-30, 68.11 38d in 138 aa.
       0.800
CBO3038
Hypothetical protein; No significant database matches.
       0.792
CBO3032A
Hypothetical protein; Weakly similar to the very C-terminus of several Eukaryotic heat shock proteins.
       0.758
CBO3031
Conserved hypothetical protein.
       0.573
CBO3032
Hypothetical phage-related membrane protein; Partial similarity to the C-terminus of several bacteriophage tail length determining proteins.
       0.571
CBO3031A
Hypothetical protein; No significant database matches.
       0.570
CBO3030
Similar to Clostridium tetani conserved protein ctc01102 SWALL:Q896A7 (EMBL:AE015939) (110 aa) fasta scores: E(): 9.8e-23, 56.36 38d in 110 aa.
       0.564
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.