Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO3041Hypothetical phage-related protein; Similar to many putative phage replication and chromosome replication proteins. (282 aa)    
Predicted Functional Partners:
CBO3042
Hypothetical phage-related protein; Similar to Streptococcus mitis phage SM1 gp19 SWALL:AAP81901 (EMBL:AY007505) (265 aa) fasta scores: E(): 1.1e-24, 38.14 38d in 270 aa, and to Staphylococcus aureus prophage phiPV83 orf 20 SWALL:Q9MBR9 (EMBL:AB044554) (267 aa) fasta scores: E(): 2.3e-21, 33.33 38d in 288 aa.
  
  
 0.840
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.738
CBO3040
Hypothetical protein; No significant database matches.
       0.603
CBO3043
Putative DNA-binding protein.
       0.550
CBO1693
Phage protein.
 
  
 0.475
CBO3044
Similar to several bacteriophage Cro-like regulatory proteins.
  
    0.472
CBO3045
Putative DNA-binding protein.
 
    0.434
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.424
CBO2379
Hypothetical phage protein.
 
  
 0.411
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.