STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mviNCapsular polysaccharide biosynthesis protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (518 aa)    
Predicted Functional Partners:
CBO3096
Putative glycosyltransferase.
       0.793
wzx
O antigen repeat unit flippase.
     
 0.770
CBO0102
Similar to Escherichia coli mannose-1-phosphate guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51 id in 356 aa, and to Clostridium tetani mannose-6-phosphate isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa) fasta scores: E(): 5.9e-94,70.33 38d in 354 aa.
     
 0.753
wzx-2
Putative O-antigen flippase.
     
 0.711
uppS-2
Putative undecaprenyl pyrophosphate synthetase.
      
 0.682
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.664
mrdB
Probable cell cycle protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
   
 0.663
spoVD
Putative sporulation specific penicillin-binding protein (stage V sporulation protein D).
 
  
 0.627
CBO3097
Putative glycosyltransferase.
       0.612
CBO3093
Phospho-glucosyltransferase.
     
 0.611
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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