Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wzyPutative O-antigen polymerase. (410 aa)    
Predicted Functional Partners:
wzx-2
Putative O-antigen flippase.
  
  
 0.670
CBO3099
Putative glycosyltransferase.
  
  
 0.639
CBO3100
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.620
CBO3101
Putative capsular polysaccharide biosynthesis glycosyl transferase.
  
  
 0.614
CBO3102
Putative glycosyl transferase.
  
  
 0.608
CBO3106
Putative capsular polysaccharide biosynthesis transferase.
 
  
 0.602
CBO3097
Putative glycosyltransferase.
  
  
 0.598
CBO2766A
Putative glucose translocase.
  
  
 0.556
CBO3096
Putative glycosyltransferase.
 
  
 0.551
CBO2103
Putative glycosyltransferase.
 
  
 0.539
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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