STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CBO3100UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (352 aa)    
Predicted Functional Partners:
CBO3108
Putative UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.950
CBO3099
Putative glycosyltransferase.
 
  
 0.947
CBO3101
Putative capsular polysaccharide biosynthesis glycosyl transferase.
 
  
 0.879
CBO3102
Putative glycosyl transferase.
 
  
 0.873
wzx-2
Putative O-antigen flippase.
  
  
 0.814
CBO3106
Putative capsular polysaccharide biosynthesis transferase.
 
    0.801
wzy-2
Putative oligosaccharide repeat unit polymerase.
       0.728
CBO3107
Putative lipopolysaccharide biosynthesis oxidoreductase.
 
  
 0.721
CBO3097
Putative glycosyltransferase.
 
  
 0.694
CBO3104
Putative capsular polysaccharide biosynthesis leucine rich repeat protein; Similar to N-terminal region of Bacillus cereus internalin protein bc0552 SWALL:Q81I65 (EMBL:AE016999) (886 aa) fasta scores: E(): 7.1e-21, 30.16 38d in 358 aa,and to C-terminal region of Clostridium acetobutylicum possible surface protein, responsible for cell interaction, contains cell adhesion domain and chw-repeats cac3279 SWALL:Q97E37 (EMBL:AE007824) (808 aa) fasta scores: E(): 3.3e-26, 35.25 38d in 312 aa.
       0.685
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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