STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO3198Electron transfer flavoprotein beta-subunit. (259 aa)    
Predicted Functional Partners:
CBO3197
Electron transfer flavoprotein alpha-subunit.
 0.996
etfA2
Electron transfer flavoprotein alpha-subunit; N-terminal extension relative to homologues.
 0.992
etfA1
Electron transfer flavoprotein alpha-subunit.
 0.987
etfB-2
Electron transfer flavoprotein alpha-subunit.
 0.983
bcd
butyryl-CoA dehydrogenase.
 
 
 0.971
acdB
acyl-CoA dehydrogenase, short-chain specific.
 
 
 0.880
acdA
Putative acyl-CoA dehydrogenase.
 
 
 0.879
CBO0432
Putative pyridine nucleotide-disulphide oxidoreductase; Similar to Moorella thermoacetica formate dehydrogenase beta subunit fdhB SWALL:P77907 (EMBL:U73807) (707 aa) fasta scores: E(): 5.5e-36, 34.26 38d in 502 aa.
  
 
 0.851
ygfK
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.851
hbd
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.790
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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