STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO3246Conserved hypothetical protein. (110 aa)    
Predicted Functional Partners:
CBO0183
Putative pyridine nucleotide-disulphide oxidoreductase; Similar to Fusobacterium nucleatum coenzyme a disulfide reductase/ disulfide bond regulator domain fn1903 SWALL:Q8RHU1 (EMBL:AE010492) (810 aa) fasta scores: E(): 1e-163, 56.35 38d in 818 aa, and to Fusobacterium nucleatum subsp. vincentii ATCC 49256 coenzyme a disulfide reductase/ disulfide bond regulator domain fnv2089 SWALL:Q7P7P1 (EMBL:AABF01000012) (809 aa) fasta scores: E(): 2.7e-159, 55.5 38d in 818 aa; Belongs to the sulfur carrier protein TusA family.
  
  
 0.860
CBO3247
Putative ABC transporter ATP-binding protein.
 
     0.798
CBO3255
Putative lipoprotein.
 
     0.793
CBO3250
Putative ABC transporter, permease protein; 5 probable transmembrane helices predicted for CBO3249 by TMHMM2.0 at aa 28-46, 89-106, 119-138, 143-162 and 183-205.
 
     0.780
CBO3253
Hypothetical protein.
 
     0.751
CBO3254
Putative lipoprotein; Appears to have an extended C-terminus compared to most homologues.
 
     0.738
CBO3256
Putative permease.
 
     0.680
CBO3245
2-hydroxyacyl-CoA dehydratase beta-subunit; Also similar to CBO2197 (24.4 38d), CBO2202 (29.2 id), CBO3246 (37.9), CBO3289 (26.1 38d), CBO3629 (38.9 id).
 
    0.673
CBO1576
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.652
CBO2574
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.652
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.