STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
etfA2Electron transfer flavoprotein alpha-subunit; N-terminal extension relative to homologues. (398 aa)    
Predicted Functional Partners:
etfB2
Electron transfer flavoprotein beta-subunit.
 0.997
etfB1
Electron transfer flavoprotein beta-subunit.
 0.990
CBO3198
Electron transfer flavoprotein beta-subunit.
 0.990
etfB
Electron transfer flavoprotein beta-subunit.
 0.988
acdA
Putative acyl-CoA dehydrogenase.
 
 0.975
bcd
butyryl-CoA dehydrogenase.
 
 0.907
acdB
acyl-CoA dehydrogenase, short-chain specific.
 
 0.905
hymC
Putative catalytic subunit of iron-only hydrogenase.
   
 
 0.878
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
  
  
 0.840
hymB
Putative electron-transferring subunit of iron-only hydrogenase.
  
  
 0.825
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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