Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rimIPutative acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (152 aa)    
Predicted Functional Partners:
yeaZ
Putative peptidase.
 
 0.994
CBO3320
Conserved hypothetical protein.
  
  
 0.888
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
      
 0.635
CBO0171
Putative phosphoribosyl transferase; Similar to Haemophilus influenzae competence protein F ComF or hi0434 SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) fasta scores: E(): 4.7e-05, 25.83 38d in 209 aa,and to Clostridium acetobutylicum predicted amidophosphoribosyltransferase, ComC b.suntilis ortholog cac2852 SWALL:Q97F89 (EMBL:AE007783) (226 aa) fasta scores: E(): 6.3e-31, 46.63 38d in 208 aa.
     
 0.615
CBO3319
Conserved hypothetical protein; Contains 2 domain matches to Pfam domain PF01966 which usually only occurs in single copies.
       0.611
dnaK
Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
      
 0.524
CBO3317
Putative integral membrane protein.
 
     0.510
tsaD
Putative peptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
  
 0.509
CBO3318
Putative ABC transporter substrate-binding lipoprotein.
       0.495
htpG
Chaperone protein; Molecular chaperone. Has ATPase activity.
      
 0.445
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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