Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO3425Conserved hypothetical protein. (230 aa)    
Predicted Functional Partners:
CBO3424
Putative ferredoxin subunit of pyruvate:flavodoxin oxidoreductase.
 
    0.902
CBO3421
Putative subunit of pyruvate:flavodoxin oxidoreductase.
 
     0.889
CBO3423
Putative subunit of pyruvate:flavodoxin oxidoreductase.
 
     0.887
CBO3422
Putative subunit of pyruvate:flavodoxin oxidoreductase.
 
     0.880
hymB
Putative electron-transferring subunit of iron-only hydrogenase.
  
 
 0.861
CBO2689
Capsular polysaccharide biosynthesis protein.
  
 
 0.652
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
  
 
 0.637
buk1
Butyrate kinase 1; Also similar to CBO3428 (57.670 38d. in 352 aa overlap); Belongs to the acetokinase family.
       0.537
buk2
Butyrate kinase 2; Also similar to CBO3426 (57.670 38d. in 352 aa overlap); Belongs to the acetokinase family.
       0.505
nifJ2
Pyruvate-flavodoxin oxidoreductase; Also similar to CBO1192 (65.74 38d).
     
 0.493
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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