yabP protein (Clostridium botulinum A ATCC 3502)

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Score

yabP

Conserved hypothetical protein. (96 aa)

Predicted Functional Partners:

yabQ

0.987

spoIV

0.887

spoIIAB

0.860

ylbJ

0.851

spoIIR

0.832

spoIIIAC

0.813

spoIIP

0.811

spoIIID

0.796

spoIIE

0.784

spoIVB

0.780

Your Current Organism:

Clostridium botulinum A ATCC 3502

NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
spoIIAB	spoIIE	CBO3088	CBO3527	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Putative stage II sporulation protein.	0.961
spoIIAB	spoIIIAC	CBO3088	CBO1893	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Stage III sporulation protein AC.	0.698
spoIIAB	spoIIID	CBO3088	CBO0162	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Similar to Bacillus subtilis stage III sporulation protein D SpoIIID or bsu36420 SWALL:SP3D_BACSU (SWALL:P15281) (93 aa) fasta scores: E(): 1.1e-16, 62.65 id in 83 aa, and to Clostridium acetobutylicum stage iii sporulation protein D SpoIIID cac2859 SWALL:Q97F82 (EMBL:AE007783) (84 aa) fasta scores: E(): 9e-24, 89.28 id in 84 aa.	0.931
spoIIAB	spoIIP	CBO3088	CBO2965	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Putative stage II sporulation protein P.	0.935
spoIIAB	spoIIR	CBO3088	CBO0126	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Similar to Bacillus subtilis stage II sporulation protein R SpoIIR or Ipc-27d or bsu36970 SWALL:SP2R_BACSU (SWALL:P39151) (224 aa) fasta scores: E(): 1.9e-18, 35.71 id in 224 aa, and to Clostridium perfringens stage II sporulation protein R SpoIIR or cpe2211 SWALL:Q8XIB0 (EMBL:AP003193) (209 aa) fasta scores: E(): 1.5e-37,55.34 38d in 206 aa.	0.952
spoIIAB	spoIV	CBO3088	CBO2951	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Putative stage IV sporulation protein.	0.865
spoIIAB	spoIVB	CBO3088	CBO1873	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Stage IV sporulation protein B.	0.833
spoIIAB	yabP	CBO3088	CBO3532	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Conserved hypothetical protein.	0.860
spoIIAB	ylbJ	CBO3088	CBO2492	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	Putative membrane protein.	0.762
spoIIE	spoIIAB	CBO3527	CBO3088	Putative stage II sporulation protein.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.961
spoIIE	spoIIIAC	CBO3527	CBO1893	Putative stage II sporulation protein.	Stage III sporulation protein AC.	0.715
spoIIE	spoIIID	CBO3527	CBO0162	Putative stage II sporulation protein.	Similar to Bacillus subtilis stage III sporulation protein D SpoIIID or bsu36420 SWALL:SP3D_BACSU (SWALL:P15281) (93 aa) fasta scores: E(): 1.1e-16, 62.65 id in 83 aa, and to Clostridium acetobutylicum stage iii sporulation protein D SpoIIID cac2859 SWALL:Q97F82 (EMBL:AE007783) (84 aa) fasta scores: E(): 9e-24, 89.28 id in 84 aa.	0.915
spoIIE	spoIIP	CBO3527	CBO2965	Putative stage II sporulation protein.	Putative stage II sporulation protein P.	0.922
spoIIE	spoIIR	CBO3527	CBO0126	Putative stage II sporulation protein.	Similar to Bacillus subtilis stage II sporulation protein R SpoIIR or Ipc-27d or bsu36970 SWALL:SP2R_BACSU (SWALL:P39151) (224 aa) fasta scores: E(): 1.9e-18, 35.71 id in 224 aa, and to Clostridium perfringens stage II sporulation protein R SpoIIR or cpe2211 SWALL:Q8XIB0 (EMBL:AP003193) (209 aa) fasta scores: E(): 1.5e-37,55.34 38d in 206 aa.	0.953
spoIIE	spoIV	CBO3527	CBO2951	Putative stage II sporulation protein.	Putative stage IV sporulation protein.	0.772
spoIIE	spoIVB	CBO3527	CBO1873	Putative stage II sporulation protein.	Stage IV sporulation protein B.	0.774
spoIIE	yabP	CBO3527	CBO3532	Putative stage II sporulation protein.	Conserved hypothetical protein.	0.784
spoIIE	yabQ	CBO3527	CBO3531	Putative stage II sporulation protein.	Putative membrane protein.	0.438
spoIIE	ylbJ	CBO3527	CBO2492	Putative stage II sporulation protein.	Putative membrane protein.	0.767
spoIIIAC	spoIIAB	CBO1893	CBO3088	Stage III sporulation protein AC.	Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.	0.698