Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CBO3575AraC-family transcriptional regulator. (128 aa)    
Predicted Functional Partners:
CBO0703
AraC-family transcriptional regulator.
  
     0.770
CBO1198
AraC-family transcriptional regulator.
 
   0.725
CBO0623
AraC-family transcriptional regulator.
  
     0.723
CBO1044
AraC-family transcriptional regulator.
 
     0.718
CBO0305
Similar to Clostridium tetani transcriptional regulatory protein ctc00913 SWALL:Q896T5 (EMBL:AE015939) (334 aa) fasta scores: E(): 1.4e-09, 26.42 38d in 333 aa.
  
     0.699
CBO1049
AraC-family transcriptional regulator.
  
     0.675
map2
Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.672
CBO2781
AraC-family transcriptional regulator.
 
   0.667
CBO0685
AraC-family transcriptional regulator.
  
     0.654
CBO1598
AraC-family transcriptional regulator.
  
     0.625
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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