Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CBO3586Putative glycosyl transferase. (414 aa)    
Predicted Functional Partners:
grdX
Putative component of glycine reductase complex.
  
     0.461
CBO2610
DedA family membrane protein.
 
    0.432
grdE
Putative component of glycine reductase complex.
  
     0.430
CBO2055
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.426
grdD
Putative glycine/sarcosine/betaine reductase complex component C alpha subunit; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
     0.425
CBO3585
Probable sodium-solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.417
CBO1647
Signal-transduction and transcriptional-control protein (pseudogene); Putative prophage remnant.
  
     0.415
grdC
Glycine/sarcosine/betaine reductase complex component C beta subunit.
  
     0.409
CBO2686
Putative sugar transferase.
 
  
 0.402
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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