Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBO2378 | dnaB | CBO2378 | CBO3620 | Putative DNA replication protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.704 |
CBO2378 | polA | CBO2378 | CBO3014 | Putative DNA replication protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.416 |
CBO3623 | CBO3624 | CBO3623 | CBO3624 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Putative membrane protein. | 0.911 |
CBO3623 | CBO3625 | CBO3623 | CBO3625 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Conserved hypothetical protein. | 0.866 |
CBO3623 | dnaB | CBO3623 | CBO3620 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.841 |
CBO3623 | lon | CBO3623 | CBO3621 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | ATP-dependent protease La. | 0.798 |
CBO3623 | rplI | CBO3623 | CBO3622 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.904 |
CBO3623 | ssBb | CBO3623 | CBO3627 | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Single-strand binding protein. | 0.690 |
CBO3624 | CBO3623 | CBO3624 | CBO3623 | Putative membrane protein. | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.911 |
CBO3624 | CBO3625 | CBO3624 | CBO3625 | Putative membrane protein. | Conserved hypothetical protein. | 0.866 |
CBO3624 | dnaB | CBO3624 | CBO3620 | Putative membrane protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.816 |
CBO3624 | lon | CBO3624 | CBO3621 | Putative membrane protein. | ATP-dependent protease La. | 0.798 |
CBO3624 | rplI | CBO3624 | CBO3622 | Putative membrane protein. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.961 |
CBO3624 | ssBb | CBO3624 | CBO3627 | Putative membrane protein. | Single-strand binding protein. | 0.690 |
CBO3625 | CBO3623 | CBO3625 | CBO3623 | Conserved hypothetical protein. | Putative phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.866 |
CBO3625 | CBO3624 | CBO3625 | CBO3624 | Conserved hypothetical protein. | Putative membrane protein. | 0.866 |
CBO3625 | dnaB | CBO3625 | CBO3620 | Conserved hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.811 |
CBO3625 | lon | CBO3625 | CBO3621 | Conserved hypothetical protein. | ATP-dependent protease La. | 0.789 |
CBO3625 | rplI | CBO3625 | CBO3622 | Conserved hypothetical protein. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.866 |
CBO3625 | ssBb | CBO3625 | CBO3627 | Conserved hypothetical protein. | Single-strand binding protein. | 0.693 |
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