STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK77001.1Metal-dependent phosphoesterase; COG0613. (305 aa)    
Predicted Functional Partners:
ABK77000.1
Redox protein, regulator of disulfide bond formation; COG0425.
       0.637
ABK77002.1
Conserved hypothetical protein; COG1478.
       0.581
ABK78313.1
Translation factor; COG0009.
  
    0.522
nusA
Transcription elongation factor; Participates in transcription termination. Belongs to the NusA family.
 
     0.452
ABK78641.1
Phosphatase; COG0546.
 
  
 0.422
ABK77003.1
Phosphoserine phosphatase; COG0560.
       0.408
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.