STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK77143.1Zn-dependent alcohol dehydrogenase; COG1064. (335 aa)    
Predicted Functional Partners:
ABK78029.1
Zn-dependent alcohol dehydrogenase; COG1064.
  
  
 
0.914
ABK77182.1
Alcohol dehydrogenase, class IV; COG1454.
  
 
 0.676
ABK77142.1
Hypothetical protein.
       0.512
ABK78187.1
DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family.
 
 
    0.486
ABK77262.1
L-iditol 2-dehydrogenase/threonine dehydrogenase; COG1063.
 
 
0.468
ABK77144.1
Hypothetical protein.
       0.444
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.