STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK77328.1ATPase; COG0433. (883 aa)    
Predicted Functional Partners:
ABK77327.1
Flp pilus assembly protein; COG2064.
       0.775
ABK77324.1
Hypothetical protein.
       0.773
ABK77325.1
Hypothetical protein.
       0.773
ABK77326.1
Hypothetical protein.
       0.773
ABK77329.1
Hypothetical protein.
       0.693
ABK77302.1
ATPase/type IV secretory pathway component; COG0433.
  
     0.662
ABK77323.1
DNA modification methylase; COG0863.
       0.582
ABK77321.1
Micrococcal nuclease-like protein; COG1525.
       0.568
ABK77320.1
Hypothetical protein.
       0.562
ABK77322.1
Hypothetical protein.
       0.562
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.