STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps17Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (109 aa)    
Predicted Functional Partners:
rps3ae
Ribosomal protein S3AE; COG1890; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.999
rps15
Ribosomal protein S15P/S13E; COG0184.
  
 0.999
rps17e
Ribosomal protein S17E; COG1383; Belongs to the eukaryotic ribosomal protein eS17 family.
   
 0.999
ABK76753.1
Ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.999
ABK76897.1
Conserved hypothetical protein.
   
 0.999
rpl7ae
Ribosomal protein H6-type; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 0.999
rps28e
Ribosomal protein S28E/S33; COG2053; Belongs to the eukaryotic ribosomal protein eS28 family.
   
 0.999
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA.
   
 
 0.999
rpl15
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
 
 
 0.999
rpl30
Ribosomal protein L30/L7E; COG1841.
  
 
 0.999
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.