STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK77688.15-methyltetrahydrofolate--homocysteine S-methyltransferase; COG5012. (162 aa)    
Predicted Functional Partners:
ABK77691.1
Protoporphyrinogen oxidase; COG1232.
 
  
 0.722
ABK77262.1
L-iditol 2-dehydrogenase/threonine dehydrogenase; COG1063.
  
  
 0.525
ABK77689.1
Hypothetical protein.
       0.486
ABK77566.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain; COG0646.
  
  
 0.470
ABK77690.1
Secreted periplasmic Zn-dependent protease.
       0.468
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.