STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK77924.1Transcriptional regulator; COG1522. (339 aa)    
Predicted Functional Partners:
ABK78038.1
Conserved hypothetical protein; COG3253.
 
    
 0.763
ABK77915.1
Fe-S oxidoreductase; COG0535.
 
  
 0.744
ABK77923.1
Hypothetical protein.
       0.560
ABK77921.1
Hypothetical protein.
       0.494
ABK77922.1
Hypothetical protein.
       0.494
ABK78026.1
Siroheme synthase/precorrin-2 oxidase; COG1648.
 
   
 0.490
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.