STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK78064.1H -ATPase subunit chain K. (99 aa)    
Predicted Functional Partners:
ABK77263.1
Hypothetical protein.
  
 0.999
ABK78066.1
Archaeal/vacuolar-type H -ATPase subunit D; COG1394.
 
 0.999
atpB
Archaeal/vacuolar-type H -ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
 
 0.999
atpA
Archaeal/vacuolar-type H -ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpE
Archaeal/vacuolar-type H -ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
ABK78073.1
Archaeal/vacuolar-type H -ATPase subunit I; COG1269; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
ABK78078.1
Archaeal/vacuolar-type H -ATPase subunit C; COG1527.
  
 0.999
ABK78354.1
Hypothetical protein.
  
 0.963
rps14
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
  
  
 0.923
ABK77763.1
Ribosomal protein L16/L10E; COG0197.
  
  
 0.916
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.