STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK78123.1Uncharacterized protein conserved in archaea; COG1701. (252 aa)    
Predicted Functional Partners:
ABK78124.1
Archaeal suger kinase; COG1829.
 
  
 0.995
ABK78121.1
Phosphopantothenoylcysteine synthetase/decarboxylase; COG0452.
 
  
 0.979
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
     
 0.787
ABK78473.1
dephospho-CoA kinase; COG0237.
 
     0.595
ABK77019.1
Archaeal enzyme of ATP-grasp superfamily; COG1938.
  
     0.580
ABK78602.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; COG2266.
  
     0.561
ABK78125.1
Phosphate uptake regulator; COG0704.
       0.558
ABK78120.1
SAM dependent methyltransferase; COG0500.
       0.544
tiaS
DNA-binding protein containing a Zn-ribbon domain; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
 
     0.531
rps3ae
Ribosomal protein S3AE; COG1890; Belongs to the eukaryotic ribosomal protein eS1 family.
  
     0.523
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.