STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK78406.1Copper binding protein, plastocyanin/azurin family; COG3794. (331 aa)    
Predicted Functional Partners:
ABK78405.1
Copper binding protein, plastocyanin/azurin family; COG3794.
 
    
0.658
ABK78403.1
Conserved hypothetical protein.
 
     0.510
ABK78404.1
Copper binding protein, plastocyanin/azurin family; COG3794.
 
    
0.507
ABK78202.1
Multicopper oxidase; COG2132.
 
 
 
 0.485
ABK77215.1
WD-40 repeat protein.
 
 
   0.424
ABK77141.1
WD-40 repeat protein; COG3391.
 
 
   0.413
Your Current Organism:
Cenarchaeum symbiosum
NCBI taxonomy Id: 414004
Other names: C. symbiosum A, Cenarchaeum symbiosum A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.