node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK77043.1 | ABK78166.1 | CENSYa_0408 | CENSYa_1544 | Zn ribbon protein. | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | 0.998 |
ABK77043.1 | ABK78187.1 | CENSYa_0408 | CENSYa_1567 | Zn ribbon protein. | DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family. | 0.998 |
ABK77043.1 | rpoH | CENSYa_0408 | CENSYa_1568 | Zn ribbon protein. | DNA-directed RNA polymerase, subunit H, RpoH/RPB5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
ABK77043.1 | rpoK | CENSYa_0408 | CENSYa_0303 | Zn ribbon protein. | DNA-directed RNA polymerase, subunit K/omega; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.999 |
ABK77043.1 | tbp | CENSYa_0408 | CENSYa_0092 | Zn ribbon protein. | TATA-box binding protein (TBP), component of TFIID and TFIIIB; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.777 |
ABK77043.1 | tbp-3 | CENSYa_0408 | CENSYa_1234 | Zn ribbon protein. | TATA-box binding protein (TBP), component of TFIID and TFIIIB; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.777 |
ABK77043.1 | tfb-3 | CENSYa_0408 | CENSYa_1884 | Zn ribbon protein. | Transcription initiation factor TFIIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.671 |
ABK77043.1 | tfe | CENSYa_0408 | CENSYa_1760 | Zn ribbon protein. | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.996 |
ABK77461.1 | ABK78187.1 | CENSYa_0828 | CENSYa_1567 | Translation initiation factor 2, beta subunit/eIF-5 N-terminal domain; COG1601. | DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family. | 0.452 |
ABK77461.1 | tfb-3 | CENSYa_0828 | CENSYa_1884 | Translation initiation factor 2, beta subunit/eIF-5 N-terminal domain; COG1601. | Transcription initiation factor TFIIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.651 |
ABK78166.1 | ABK77043.1 | CENSYa_1544 | CENSYa_0408 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | Zn ribbon protein. | 0.998 |
ABK78166.1 | ABK78187.1 | CENSYa_1544 | CENSYa_1567 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family. | 0.999 |
ABK78166.1 | rpoH | CENSYa_1544 | CENSYa_1568 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | DNA-directed RNA polymerase, subunit H, RpoH/RPB5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.999 |
ABK78166.1 | rpoK | CENSYa_1544 | CENSYa_0303 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | DNA-directed RNA polymerase, subunit K/omega; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.999 |
ABK78166.1 | tbp | CENSYa_1544 | CENSYa_0092 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | TATA-box binding protein (TBP), component of TFIID and TFIIIB; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.896 |
ABK78166.1 | tbp-3 | CENSYa_1544 | CENSYa_1234 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | TATA-box binding protein (TBP), component of TFIID and TFIIIB; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.899 |
ABK78166.1 | tfb-3 | CENSYa_1544 | CENSYa_1884 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | Transcription initiation factor TFIIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.697 |
ABK78166.1 | tfe | CENSYa_1544 | CENSYa_1760 | DNA-directed RNA polymerase, alpha subunit/40 kD subunit; COG0202. | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.996 |
ABK78187.1 | ABK77043.1 | CENSYa_1567 | CENSYa_0408 | DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family. | Zn ribbon protein. | 0.998 |
ABK78187.1 | ABK77461.1 | CENSYa_1567 | CENSYa_0828 | DNA-directed RNA polymerase, beta subunit/140 kD subunit; COG0085; Belongs to the RNA polymerase beta chain family. | Translation initiation factor 2, beta subunit/eIF-5 N-terminal domain; COG1601. | 0.452 |