STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG57828.1Hypothetical protein. (646 aa)    
Predicted Functional Partners:
SFH00399.1
F5/8 type C domain-containing protein.
  
 
  0.621
SFG57857.1
C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.
  
   0.616
SFH00227.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.573
SFH46050.1
Peptidase M60, enhancin and enhancin-like.
  
 
  0.550
SFG83123.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.525
SFG57905.1
Starch-binding associating with outer membrane.
   
   0.495
SFG57757.1
TonB-linked outer membrane protein, SusC/RagA family.
   
   0.486
SFG57879.1
TonB-linked outer membrane protein, SusC/RagA family.
   
   0.469
SFH44053.1
N-terminal domain of Peptidase_S41.
  
   0.466
SFH00303.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.451
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.