STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG67878.1Thiol-disulfide isomerase or thioredoxin. (456 aa)    
Predicted Functional Partners:
SFG67898.1
Thiol-disulfide isomerase or thioredoxin.
 
    
0.835
SFG67838.1
Peroxiredoxin.
 
    
0.833
SFG67858.1
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
       0.773
SFG61936.1
Peroxiredoxin.
  
     0.748
SFH41073.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.713
SFH17901.1
Peroxiredoxin.
  
     0.673
SFG67918.1
Hypothetical protein.
       0.566
SFG67814.1
PKD-like family protein.
       0.550
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
  0.497
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
  0.497
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.