STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG73574.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.797
SFG73634.1
Protein of unknown function.
 
     0.761
SFG77150.1
Hypothetical protein.
  
     0.695
SFG55777.1
Hypothetical protein.
  
     0.654
SFG67205.1
Hypothetical protein.
  
     0.600
SFG63925.1
Protein of unknown function.
  
     0.596
SFH17801.1
Aspartyl protease.
  
     0.580
SFG94940.1
Putative porin.
  
     0.558
SFG61647.1
Hypothetical protein.
  
     0.555
SFG60102.1
Glycosyl transferase family 2.
  
     0.550
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.