STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG93290.1Exosortase/archaeosortase family protein. (194 aa)    
Predicted Functional Partners:
SFG93182.1
Hypothetical protein.
 
    0.869
SFG93212.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.862
SFG93150.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.860
SFG93261.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.856
SFG93086.1
Glycosyl transferase family 2.
  
 
 0.837
SFG93273.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.813
SFG93243.1
Hypothetical protein.
 
     0.776
SFG93309.1
Carbamoyltransferase.
       0.761
SFG93165.1
Glycosyl transferases group 1.
 
    0.759
SFG93198.1
Methyltransferase, FkbM family.
 
     0.744
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.