STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH01703.1Putative ABC transport system permease protein. (798 aa)    
Predicted Functional Partners:
SFH01673.1
ABC-type lipoprotein export system, ATPase component.
 
 0.996
SFH01537.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SFH34512.1
Putative ABC transport system ATP-binding protein.
 
 0.989
macB
Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.986
SFH48688.1
Putative ABC transport system ATP-binding protein.
 
 0.983
SFG75876.1
Putative ABC transport system ATP-binding protein.
  
 0.979
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.979
SFH01516.1
HlyD family secretion protein.
 
 
 0.899
SFH01475.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.801
SFH46514.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.739
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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