Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG75060.1 | SFH02143.1 | SAMN04489864_10296 | SAMN04489864_104140 | Low affinity Fe/Cu permease. | Ferritin-like metal-binding protein YciE. | 0.541 |
SFH02046.1 | SFH02143.1 | SAMN04489864_104134 | SAMN04489864_104140 | Putative membrane protein. | Ferritin-like metal-binding protein YciE. | 0.436 |
SFH02143.1 | SFG75060.1 | SAMN04489864_104140 | SAMN04489864_10296 | Ferritin-like metal-binding protein YciE. | Low affinity Fe/Cu permease. | 0.541 |
SFH02143.1 | SFH02046.1 | SAMN04489864_104140 | SAMN04489864_104134 | Ferritin-like metal-binding protein YciE. | Putative membrane protein. | 0.436 |
SFH02143.1 | SFH02159.1 | SAMN04489864_104140 | SAMN04489864_104141 | Ferritin-like metal-binding protein YciE. | Hypothetical protein. | 0.823 |
SFH02143.1 | SFH02180.1 | SAMN04489864_104140 | SAMN04489864_104143 | Ferritin-like metal-binding protein YciE. | Xaa-Pro aminopeptidase. | 0.411 |
SFH02143.1 | SFH02194.1 | SAMN04489864_104140 | SAMN04489864_104144 | Ferritin-like metal-binding protein YciE. | Thioesterase-3. | 0.439 |
SFH02143.1 | SFH11540.1 | SAMN04489864_104140 | SAMN04489864_105169 | Ferritin-like metal-binding protein YciE. | General stress protein 26. | 0.574 |
SFH02143.1 | SFH23708.1 | SAMN04489864_104140 | SAMN04489864_10728 | Ferritin-like metal-binding protein YciE. | Bifunctional non-homologous end joining protein LigD. | 0.632 |
SFH02143.1 | SFH40171.1 | SAMN04489864_104140 | SAMN04489864_11124 | Ferritin-like metal-binding protein YciE. | Hypothetical protein. | 0.412 |
SFH02143.1 | SFH46067.1 | SAMN04489864_104140 | SAMN04489864_11366 | Ferritin-like metal-binding protein YciE. | Putative membrane protein. | 0.494 |
SFH02159.1 | SFH02143.1 | SAMN04489864_104141 | SAMN04489864_104140 | Hypothetical protein. | Ferritin-like metal-binding protein YciE. | 0.823 |
SFH02159.1 | SFH02180.1 | SAMN04489864_104141 | SAMN04489864_104143 | Hypothetical protein. | Xaa-Pro aminopeptidase. | 0.482 |
SFH02159.1 | SFH02194.1 | SAMN04489864_104141 | SAMN04489864_104144 | Hypothetical protein. | Thioesterase-3. | 0.569 |
SFH02159.1 | SFH11540.1 | SAMN04489864_104141 | SAMN04489864_105169 | Hypothetical protein. | General stress protein 26. | 0.422 |
SFH02180.1 | SFH02143.1 | SAMN04489864_104143 | SAMN04489864_104140 | Xaa-Pro aminopeptidase. | Ferritin-like metal-binding protein YciE. | 0.411 |
SFH02180.1 | SFH02159.1 | SAMN04489864_104143 | SAMN04489864_104141 | Xaa-Pro aminopeptidase. | Hypothetical protein. | 0.482 |
SFH02180.1 | SFH02194.1 | SAMN04489864_104143 | SAMN04489864_104144 | Xaa-Pro aminopeptidase. | Thioesterase-3. | 0.558 |
SFH02194.1 | SFH02143.1 | SAMN04489864_104144 | SAMN04489864_104140 | Thioesterase-3. | Ferritin-like metal-binding protein YciE. | 0.439 |
SFH02194.1 | SFH02159.1 | SAMN04489864_104144 | SAMN04489864_104141 | Thioesterase-3. | Hypothetical protein. | 0.569 |
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