STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH00855.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SFH33097.1
Protein of unknown function.
  
     0.704
SFH00874.1
Conserved hypothetical protein.
       0.675
SFH37158.1
Hypothetical protein.
  
     0.581
SFH00835.1
Predicted metalloprotease, contains C-terminal PDZ domain.
       0.519
SFH37188.1
Uncharacterized conserved protein RhaS, contains 28 RHS repeats.
  
     0.477
SFH00888.1
Drug resistance transporter, Bcr/CflA subfamily.
       0.431
SFH00814.1
CubicO group peptidase, beta-lactamase class C family.
  
    0.410
SFH00802.1
Hexosaminidase.
       0.406
SFH00362.1
Protein of unknown function.
  
     0.400
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.