Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG61647.1 | SFG67205.1 | SAMN04489864_101272 | SAMN04489864_101538 | Hypothetical protein. | Hypothetical protein. | 0.679 |
SFG61647.1 | SFH08795.1 | SAMN04489864_101272 | SAMN04489864_10511 | Hypothetical protein. | Thiamine pyrophosphokinase. | 0.625 |
SFG61647.1 | SFH20974.1 | SAMN04489864_101272 | SAMN04489864_106240 | Hypothetical protein. | Hypothetical protein. | 0.426 |
SFG67205.1 | SFG61647.1 | SAMN04489864_101538 | SAMN04489864_101272 | Hypothetical protein. | Hypothetical protein. | 0.679 |
SFG67205.1 | SFH08795.1 | SAMN04489864_101538 | SAMN04489864_10511 | Hypothetical protein. | Thiamine pyrophosphokinase. | 0.711 |
SFG67205.1 | SFH35662.1 | SAMN04489864_101538 | SAMN04489864_109163 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.610 |
SFH08773.1 | SFH08795.1 | SAMN04489864_10510 | SAMN04489864_10511 | Acetyltransferase (GNAT) domain-containing protein. | Thiamine pyrophosphokinase. | 0.850 |
SFH08773.1 | SFH08814.1 | SAMN04489864_10510 | SAMN04489864_10512 | Acetyltransferase (GNAT) domain-containing protein. | Protein of unknown function. | 0.553 |
SFH08795.1 | SFG61647.1 | SAMN04489864_10511 | SAMN04489864_101272 | Thiamine pyrophosphokinase. | Hypothetical protein. | 0.625 |
SFH08795.1 | SFG67205.1 | SAMN04489864_10511 | SAMN04489864_101538 | Thiamine pyrophosphokinase. | Hypothetical protein. | 0.711 |
SFH08795.1 | SFH08773.1 | SAMN04489864_10511 | SAMN04489864_10510 | Thiamine pyrophosphokinase. | Acetyltransferase (GNAT) domain-containing protein. | 0.850 |
SFH08795.1 | SFH08814.1 | SAMN04489864_10511 | SAMN04489864_10512 | Thiamine pyrophosphokinase. | Protein of unknown function. | 0.553 |
SFH08795.1 | SFH20974.1 | SAMN04489864_10511 | SAMN04489864_106240 | Thiamine pyrophosphokinase. | Hypothetical protein. | 0.552 |
SFH08795.1 | SFH35662.1 | SAMN04489864_10511 | SAMN04489864_109163 | Thiamine pyrophosphokinase. | DNA-binding transcriptional regulator, MarR family. | 0.590 |
SFH08795.1 | SFH43600.1 | SAMN04489864_10511 | SAMN04489864_11276 | Thiamine pyrophosphokinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.591 |
SFH08795.1 | adk | SAMN04489864_10511 | SAMN04489864_103305 | Thiamine pyrophosphokinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.736 |
SFH08795.1 | rsgA | SAMN04489864_10511 | SAMN04489864_108203 | Thiamine pyrophosphokinase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.830 |
SFH08795.1 | thiL | SAMN04489864_10511 | SAMN04489864_105111 | Thiamine pyrophosphokinase. | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.822 |
SFH08814.1 | SFH08773.1 | SAMN04489864_10512 | SAMN04489864_10510 | Protein of unknown function. | Acetyltransferase (GNAT) domain-containing protein. | 0.553 |
SFH08814.1 | SFH08795.1 | SAMN04489864_10512 | SAMN04489864_10511 | Protein of unknown function. | Thiamine pyrophosphokinase. | 0.553 |
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