STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH28859.1Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (570 aa)    
Predicted Functional Partners:
SFH28878.1
GlcNAc-PI de-N-acetylase.
 
     0.925
SFH28843.1
Protein of unknown function.
  
     0.700
SFG62887.1
PAS domain S-box-containing protein.
   
 
 0.682
SFG88082.1
Protein of unknown function.
 
     0.679
SFH13381.1
Protein of unknown function.
  
     0.624
SFH41571.1
Signal transduction histidine kinase.
    
 0.616
SFH03418.1
L-proline dehydrogenase.
  
  
 0.581
SFG65348.1
Signal transduction histidine kinase.
     
 0.514
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.503
SFH28894.1
Hypothetical protein.
       0.444
Your Current Organism:
Pedobacter insulae
NCBI taxonomy Id: 414048
Other names: DSM 18684, KCTC 12820, P. insulae, Pedobacter insulae Yoon et al. 2007, strain DS-139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.