Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182IJG3 | A0A182IU38 | Tyrosine--tRNA ligase. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.662 |
A0A182IJG3 | A0A182IUV8 | Tyrosine--tRNA ligase. | Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.567 |
A0A182IJG3 | A0A182IVP1 | Tyrosine--tRNA ligase. | Uncharacterized protein. | 0.525 |
A0A182IJG3 | A0A182IWG6 | Tyrosine--tRNA ligase. | Triosephosphate isomerase. | 0.680 |
A0A182IJG3 | A0A182J4J4 | Tyrosine--tRNA ligase. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.757 |
A0A182IJG3 | A0A182J5B6 | Tyrosine--tRNA ligase. | Plug_translocon domain-containing protein. | 0.611 |
A0A182IJG3 | A0A182J7L4 | Tyrosine--tRNA ligase. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.662 |
A0A182INK8 | A0A182IVP1 | Uncharacterized protein. | Uncharacterized protein. | 0.526 |
A0A182IQX1 | A0A182IVP1 | Thymidylate_kin domain-containing protein. | Uncharacterized protein. | 0.426 |
A0A182IQX1 | A0A182IWG6 | Thymidylate_kin domain-containing protein. | Triosephosphate isomerase. | 0.547 |
A0A182IQX1 | A0A182J4J4 | Thymidylate_kin domain-containing protein. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.920 |
A0A182IU38 | A0A182IJG3 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Tyrosine--tRNA ligase. | 0.662 |
A0A182IU38 | A0A182IVP1 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Uncharacterized protein. | 0.414 |
A0A182IU38 | A0A182IWG6 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Triosephosphate isomerase. | 0.401 |
A0A182IU38 | A0A182J4J4 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.606 |
A0A182IU38 | A0A182J5B6 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Plug_translocon domain-containing protein. | 0.539 |
A0A182IUV8 | A0A182IJG3 | Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Tyrosine--tRNA ligase. | 0.567 |
A0A182IUV8 | A0A182IVP1 | Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Uncharacterized protein. | 0.513 |
A0A182IVP1 | A0A182IJG3 | Uncharacterized protein. | Tyrosine--tRNA ligase. | 0.525 |
A0A182IVP1 | A0A182INK8 | Uncharacterized protein. | Uncharacterized protein. | 0.526 |
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