STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE87204.1ATP-dependent DNA helicase DinG; Derived by automated computational analysis using gene prediction method: Protein Homology. (690 aa)    
Predicted Functional Partners:
OOE85411.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.980
OOE86010.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.979
OOE83501.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.979
OOE79372.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.943
OOE87382.1
DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.939
OOE82123.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.936
OOE87738.1
Flap endonuclease Xni; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
OOE86759.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.915
OOE87524.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
OOE86915.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.884
Your Current Organism:
Salinivibrio siamensis
NCBI taxonomy Id: 414286
Other names: JCM 14472, PCU 301, PCU:301, S. siamensis, Salinivibrio siamensis Chamroensaksri et al. 2009, strain ND1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.