STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE86675.1Thiamine/thiamine pyrophosphate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)    
Predicted Functional Partners:
OOE86674.1
Thiamine ABC transporter substrate binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
OOE86676.1
Thiamine ABC transporter, ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
OOE87883.1
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.884
OOE87881.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.875
OOE85847.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.871
OOE80026.1
Putrescine/spermidine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.858
OOE86152.1
Thiamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.838
OOE85023.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.836
OOE86932.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.833
OOE84563.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.821
Your Current Organism:
Salinivibrio siamensis
NCBI taxonomy Id: 414286
Other names: JCM 14472, PCU 301, PCU:301, S. siamensis, Salinivibrio siamensis Chamroensaksri et al. 2009, strain ND1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.