STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE84889.1NADH:ubiquinone reductase (Na(+)-transporting) subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
OOE84938.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OOE84890.1
Na(+)-translocating NADH-quinone reductase subunit C; Uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OOE84891.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OOE84892.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OOE84893.1
NADH:ubiquinone reductase (Na(+)-transporting) subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OOE84894.1
FAD:protein FMN transferase ApbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.875
OOE84895.1
Na(+)-translocating NADH-quinone reductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
OOE86561.1
Electron transport complex subunit RsxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.604
OOE86556.1
Electron transport complex subunit RsxE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.596
Your Current Organism:
Salinivibrio siamensis
NCBI taxonomy Id: 414286
Other names: JCM 14472, PCU 301, PCU:301, S. siamensis, Salinivibrio siamensis Chamroensaksri et al. 2009, strain ND1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.