STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE82590.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
OOE84217.1
Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
OOE84219.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
OOE82272.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
OOE85432.1
Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.618
OOE84218.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
OOE85413.1
Cytochrome c4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
OOE83881.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
OOE80017.1
Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
OOE86349.1
Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.469
OOE79157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
Your Current Organism:
Salinivibrio siamensis
NCBI taxonomy Id: 414286
Other names: JCM 14472, PCU 301, PCU:301, S. siamensis, Salinivibrio siamensis Chamroensaksri et al. 2009, strain ND1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.