STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK64496.1PFAM: protein of unknown function DUF445; KEGG: npu:Npun_R4433 hypothetical protein. (417 aa)    
Predicted Functional Partners:
ACK64957.1
KEGG: syn:ssl1918 hypothetical protein.
 
     0.767
ACK68021.1
KEGG: ava:Ava_3632 hypothetical protein.
  
     0.767
ACK68084.1
PFAM: Domain of unknown function DUF1815; KEGG: amr:AM1_5370 hypothetical protein.
  
     0.767
ACK64905.1
KEGG: mar:MAE_53690 hypothetical protein.
  
     0.761
ACK66317.1
KEGG: mar:MAE_25460 hypothetical protein.
  
     0.761
ACK65956.1
KEGG: ava:Ava_1924 hypothetical protein.
  
     0.759
ACK68308.1
KEGG: npu:Npun_R4158 hypothetical protein.
  
     0.739
ACK66442.1
KEGG: mar:MAE_04000 glycogen debranching enzyme.
  
     0.732
ACK65349.1
KEGG: ava:Ava_3598 hypothetical protein.
  
     0.724
ACK65477.1
KEGG: mar:MAE_55860 hypothetical protein.
  
     0.679
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.