STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK64889.1TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycobilisome protein; KEGG: syn:slr1459 allophycocyanin beta-18 subunit. (169 aa)    
Predicted Functional Partners:
ACK66103.1
PFAM: Phycobilisome linker polypeptide; Phycobilisome protein; KEGG: mar:MAE_49370 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 0.998
ACK66789.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 0.998
ACK65292.1
PFAM: Phycobilisome protein; KEGG: mar:MAE_46230 allophycocyanin-B.
 
 
0.993
ACK66787.1
PFAM: Phycobilisome protein; KEGG: mar:MAE_10270 allophycocyanin alpha subunit.
 
 
0.992
ACK66788.1
TIGRFAM: allophycocyanin, beta subunit; PFAM: Phycobilisome protein; KEGG: syn:slr1986 allophycocyanin beta subunit.
  
 
0.991
ACK65415.1
PFAM: Phycobilisome linker polypeptide; KEGG: mar:MAE_48340 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.981
ACK67058.1
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: mar:MAE_24480 phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
 0.976
ACK67693.1
PFAM: Phycobilisome protein; KEGG: mar:MAE_51670 phycocyanin alpha subunit.
  
 
 
 0.952
ACK67057.1
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: syn:sll1579 phycobilisome rod linker polypeptide Lr, phycocyanin-associated; Belongs to the phycobilisome linker protein family.
  
 
 
 0.929
ACK67055.1
TIGRFAM: phycocyanin, beta subunit; PFAM: Phycobilisome protein; KEGG: mar:MAE_24450 phycocyanin beta subunit.
  
 
 
0.896
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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