STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK65105.1KEGG: mar:MAE_07730 hypothetical protein. (635 aa)    
Predicted Functional Partners:
ACK67398.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.928
ACK64608.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; KEGG: syn:sll0254 bifunctional lycopene cyclase/dioxygenase.
  
  
 0.927
ACK64641.1
PFAM: FAD dependent oxidoreductase; KEGG: mar:MAE_54440 FAD dependent oxidoreductase.
  
  
0.922
ACK65674.1
PFAM: fatty acid desaturase; KEGG: mar:MAE_07370 beta-carotene hydroxylase.
   
 
 0.914
ACK65372.1
TIGRFAM: carotene isomerase; PFAM: FAD dependent oxidoreductase; KEGG: mar:MAE_12360 carotene isomerase.
   
 
 0.901
ACK64952.1
KEGG: mar:MAE_59400 hypothetical protein.
  
   
 0.758
ACK66913.1
PFAM: Tic22 family proein; KEGG: syn:slr0924 periplasmic protein, function unknown.
  
     0.755
ACK65352.1
KEGG: mar:MAE_30610 hypothetical protein.
  
     0.725
ACK65979.1
KEGG: mar:MAE_50380 GCN5-related N-acetyltransferase like.
  
    0.723
ACK65993.1
RNA-binding protein (contains KH domain)-like protein; KEGG: npu:Npun_F2859 hypothetical protein.
  
     0.713
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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