STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK65901.1PFAM: protein of unknown function DUF820; KEGG: ava:Ava_2334 hypothetical protein. (206 aa)    
Predicted Functional Partners:
ACK65570.1
KEGG: mar:MAE_08340 hypothetical protein.
  
     0.752
ACK65749.1
KEGG: mar:MAE_08340 hypothetical protein.
  
     0.734
ACK67518.1
KEGG: mar:MAE_08340 hypothetical protein.
  
     0.727
ACK67202.1
KEGG: npu:Npun_AR283 hypothetical protein.
  
     0.723
ACK67208.1
KEGG: npu:Npun_F1143 hypothetical protein.
  
     0.722
ACK64321.1
PFAM: protein of unknown function DUF450; KEGG: npu:Npun_R6476 hypothetical protein.
  
     0.719
ACK64502.1
PFAM: protein of unknown function DUF450; KEGG: ter:Tery_2764 hypothetical protein.
  
     0.674
ACK68308.1
KEGG: npu:Npun_R4158 hypothetical protein.
  
     0.660
ACK66228.1
PFAM: protein of unknown function DUF820; KEGG: mar:MAE_52180 hypothetical protein.
  
     0.635
ACK67613.1
KEGG: ana:all5060 hypothetical protein.
  
     0.626
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.