Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACK67183.1PFAM: Extracellular ligand-binding receptor; KEGG: mar:MAE_32490 periplasmic binding protein. (440 aa)    
Predicted Functional Partners:
ACK64424.1
PFAM: inner-membrane translocator; KEGG: syn:sll0146 ABC-type neutral amino acid transport system permease protein.
 
 
 0.992
ACK67377.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_00310 amino acid transport ATP-binding protein.
 
 
 0.988
ACK64800.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_01200 amino acid transport ATP-binding protein.
 
 
 0.982
ACK65631.1
PFAM: inner-membrane translocator; KEGG: syn:slr0949 ABC-type neutral amino acid transport system permease protein.
 
 
 0.981
ACK67685.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: syn:sll1499 ferredoxin-dependent glutamate synthase.
     
 0.586
ACK67182.1
PFAM: protein of unknown function DUF29; KEGG: cyb:CYB_1910 hypothetical protein.
       0.532
ACK64610.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ter:Tery_2001 ABC transporter related.
  
  
 0.511
ACK67580.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ter:Tery_2000 polar amino acid ABC transporter, inner membrane subunit.
  
 
 
 0.498
ACK66095.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mar:MAE_32020 amino-acid ABC-transporter permease protein.
  
   
 0.491
ACK66189.1
Response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: npu:Npun_F1553 diguanylate cyclase with PAS/PAC and GAF sensors.
  
    0.421
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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