STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK67343.1Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mar:MAE_14380 OmpR family two-component response regulator. (257 aa)    
Predicted Functional Partners:
ACK64901.1
KEGG: npu:Npun_R3691 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.875
ACK68271.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: npu:Npun_F2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
0.875
ACK67425.1
KEGG: ava:Ava_3771 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.797
ACK65530.1
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: ana:all2875 two-component hybrid sensor and regulator.
  
 
 0.796
ACK67488.1
PFAM: response regulator receiver; KEGG: ana:alr5188 two-component response regulator.
  
     0.734
ACK64806.1
PFAM: response regulator receiver; KEGG: syn:slr1042 two-component response regulator (CheY subfamily), required for motility and transformation competency.
  
     0.730
ACK64204.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: syp:SYNPCC7002_A0196 hydrogenase large diaphorase subunit F.
    
 
 0.729
ACK67627.1
PFAM: response regulator receiver; KEGG: npu:Npun_F3084 response regulator receiver protein.
  
     0.722
ACK65762.1
PFAM: response regulator receiver; KEGG: ana:all0823 two-component response regulator.
  
     0.717
ACK65598.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ana:all7583 two-component sensor histidine kinase.
  
   0.715
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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