STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK68015.1PFAM: protein of unknown function DUF1092; KEGG: ana:all2318 hypothetical protein. (273 aa)    
Predicted Functional Partners:
ACK68016.1
KEGG: npu:Npun_F0728 Ap4A phosphorylase II.
       0.776
ACK65152.1
KEGG: ava:Ava_2735 tocopherol cyclase.
  
     0.726
ACK66539.1
PFAM: photosystem II oxygen evolving complex protein PsbP; KEGG: mar:MAE_24260 photosystem II oxygen-evolving complex 23K protein.
  
     0.703
ACK66926.1
PFAM: Vitamin K epoxide reductase; KEGG: mar:MAE_28930 thioredoxin-like.
  
    0.668
ACK65545.1
KEGG: ter:Tery_4494 hypothetical protein.
  
    0.667
ACK65849.1
KEGG: mar:MAE_22170 hypothetical protein.
  
     0.667
ACK67443.1
KEGG: mar:MAE_60990 hypothetical protein.
  
     0.661
ACK66534.1
KEGG: mar:MAE_21620 hypothetical protein.
  
     0.647
ACK66506.1
KEGG: mar:MAE_06590 hypothetical protein.
  
     0.628
ACK65819.1
KEGG: ava:Ava_3959 hypothetical protein.
  
     0.625
Your Current Organism:
Rippkaea orientalis
NCBI taxonomy Id: 41431
Other names: Cyanothece sp. PCC 8801, R. orientalis PCC 8801, Rippkaea orientalis PCC 8801, Synechococcus sp. PCC 8801, Synechococcus sp. RF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.